BuildAMol (formerly Biobuild) is a fragment-based molecular assembly toolkit for the generation of atomic models for complex molecular structures. It is designed to leverage the simplicity of python-coding and the power of fragment-based assembly to provide a slim and streamlined workflow. Based on biopython and accessible as a python package, BuildAMol not only offers a straightforward API to generate, manipulate, visualize, and export 3D structures of molecules, but also provides easy interfaces with other molecular modeling tools such as RDKit.
Tutorials
API Documentation
Extensions